Fitness data for PS417_15030 in Pseudomonas simiae WCS417

short-chain dehydrogenase
SEED: Short-chain dehydrogenase/reductase SDR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
soil soil sample 2; outgrowth in LB -2.1 -1.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.8 -1.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.5 -0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.5 -1.0 compare
stress Nalidixic 0.025 mg/ml -1.2 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -0.7 compare
stress Gentamicin 0.008 mg/ml -1.2 -0.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.2 -0.8 compare
phage P. simiae Grant Run MOI 10 -1.2 -0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.1 -0.9 compare
stress Chloramphenicol 0.015 mg/ml -1.1 -1.6 compare
soil soil sample 4; outgrowth in LB -1.0 -0.8 compare
phage P. simiae ORA MOI 0.1 -1.0 -0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.1 compare
solid stress Fraxetin 3 mM; solid stress +1.0 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +2.4 compare