Fitness data for PS417_15020 in Pseudomonas simiae WCS417

2-hydroxyacid dehydrogenase
SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 -2.1 compare
soil soil sample 2; outgrowth in LB -0.6 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
phage JP1 MOI 1 -0.5 -1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.8 compare
phage P. simiae ORA MOI 0.1 -0.5 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.7 compare
phage P. simiae OR Antrim MOI 0.1 -0.5 -1.5 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.7 compare
nitrogen source Ammonium chloride (N) +0.4 +2.3 compare
phage P. simiae Grant Run MOI 10 +0.5 +1.6 compare
soil soil sample 3; outgrowth in LB +0.5 +1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
motility inner cut, LB soft agar motility assay +0.6 +1.7 compare
nophagecontrol Only library +0.6 +2.5 compare