Fitness data for PS417_15010 in Pseudomonas simiae WCS417

TetR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -3.7 compare
phage Wcs_1 -0.5 -2.5 compare
phage P. simiae OR Antrim MOI 1 -0.5 -2.1 compare
motility outer cut, LB soft agar motility assay -0.5 -2.1 compare
soil soil sample 6; outgrowth in LB -0.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.8 compare
phage P. simiae OR1 MOI 0.1 -0.4 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.7 compare
phage P. simiae OR Antrim MOI 0.1 -0.4 -1.9 compare
motility outer cut, LB soft agar motility assay -0.4 -2.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -2.3 compare
soil soil sample 2; outgrowth in LB -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.9 compare
phage P. simiae Grant Run MOI 10 -0.3 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.8 compare
carbon source L-Valine (C) +0.4 +1.5 compare
stress methylglyoxal 0.032 vol% +0.5 +2.5 compare