Fitness data for PS417_14905 in Pseudomonas simiae WCS417

C4-dicarboxylate ABC transporter
SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
KEGG: C4-dicarboxylate transporter, DctQ subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.5 compare
seeds Growth on radish seeds for 72 hours -1.2 -1.4 compare
phage P. simiae Grant Run MOI 10 -1.0 -1.6 compare
carbon source acetate (C) -1.0 -2.1 compare
phage P. simiae Grant Run MOI 10 -0.9 -1.5 compare
liquid stress Scopoletin 2 mM; liquid stress -0.9 -1.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8 -1.3 compare
solid stress Fraxetin 2 mM; solid stress -0.8 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.0 compare
soil soil sample 7; outgrowth in LB +0.8 +1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.0 compare
carbon source Carbon source L-Citrulline 10 mM +0.9 +1.9 compare
motility outer cut, LB soft agar motility assay +0.9 +1.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.2 compare
seeds Growth on radish seeds for 72 hours +1.0 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1 +1.3 compare