Fitness data for PS417_14895 in Pseudomonas simiae WCS417

beta-lactamase/D-alanine carboxypeptidase
SEED: Beta-lactamase (EC 3.5.2.6)
KEGG: beta-lactamase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.4 +2.4 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.2 compare
phage JP1 MOI 10 +0.4 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.3 compare
phage JP1 MOI 0.1 +0.5 +1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.7 compare
phage JP1 MOI 1 +0.5 +1.8 compare
soil soil sample 8; outgrowth in LB +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
phage JP1 MOI 10 +0.5 +1.5 compare
seeds Growth on radish seeds for 72 hours +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.5 compare
phage JP1 MOI 1 +0.5 +2.2 compare
phage P. simiae OR Antrim MOI 0.1 +0.6 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +2.1 compare