Fitness data for PS417_14775 in Pseudomonas simiae WCS417

major facilitator transporter
SEED: Hexuronate transporter
KEGG: MFS transporter, ACS family, hexuronate transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -1.1 -3.4 compare
carbon source D-Galacturonic Acid (C) -1.0 -4.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.9 -2.1 compare
motility inner cut, LB soft agar motility assay -0.9 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.8 -2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
phage P. simiae OR Antrim MOI 1 -0.6 -1.9 compare
carbon source L-Valine (C) -0.6 -1.4 compare
soil soil sample 2; outgrowth in LB -0.6 -1.4 compare
phage P. simiae OR Antrim MOI 0.1 -0.6 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.3 compare
phage Wcs_1 +0.7 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +1.5 compare