Fitness data for PS417_14755 in Pseudomonas simiae WCS417

UV damage repair endonuclease UvdE
SEED: UV damage repair endonuclease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source Carbon source D-Mannitol 5 mM -1.7 -2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 -1.6 compare
phage JP1 MOI 0.1 -1.6 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -1.1 compare
soil soil sample 3; outgrowth in LB -1.2 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.2 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -1.5 compare
soil soil sample 8; outgrowth in LB -1.2 -1.3 compare
stress 2-Furfuraldehyde 0.03 vol% -1.2 -3.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.2 -1.0 compare
carbon source L-Histidine (C) -1.1 -1.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 +1.4 compare
carbon source 2'-Deoxyinosine 5 mM (C) +1.3 +2.7 compare
soil soil sample 4; outgrowth in LB +1.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.5 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.5 +3.0 compare
root root sample 6; outgrowth in LB +2.0 +3.1 compare