Fitness data for PS417_14545 in Pseudomonas simiae WCS417

amino acid transporter
SEED: D-serine/D-alanine/glycine transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
no phage control Time6-nophage -0.6 -3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.0 compare
nitrogen source Adenine (N) -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.8 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 -1.6 compare
phage P. simiae OR Antrim MOI 1 +0.3 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.5 compare
seeds Growth on radish seeds for 72 hours +0.4 +1.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +1.9 compare
liquid stress Scopoletin 2 mM; liquid stress +0.4 +2.5 compare
seeds Growth on radish seeds for 72 hours +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
carbon source L-Valine (C) +0.6 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.9 compare