Fitness data for PS417_14530 in Pseudomonas simiae WCS417

acetylglucosaminylphosphatidylinositol deacetylase
SEED: LmbE-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.6 compare
carbon source L-Leucine (C) -1.0 -2.3 compare
carbon source L-Valine (C) -0.9 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -2.9 compare
phage P. simiae Grant Run MOI 10 -0.9 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -1.6 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.7 -1.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.7 -1.9 compare
carbon source L-Leucine (C) -0.7 -3.6 compare
liquid stress Fraxetin 3 mM; liquid stress -0.6 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.0 compare
liquid stress 80% Methanol 1 mM; liquid stress -0.6 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
phage P. simiae OR Antrim MOI 10 +0.7 +1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +0.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.6 compare