Fitness data for PS417_14475 in Pseudomonas simiae WCS417

2-hydroxyacid dehydrogenase
SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. simiae ORA MOI 10 -0.6 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.5 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.5 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.5 +2.3 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.5 +2.3 compare
soil soil sample 7; outgrowth in LB +0.5 +1.3 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.5 +2.8 compare
ecofab LB in EcoFAB_3.5mL +0.6 +2.4 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.6 +2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.6 +3.2 compare
phage Wcs_0.1 +0.6 +3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.9 compare
carbon source L-Valine (C) +0.6 +1.6 compare
carbon source D-Galacturonic Acid (C) +0.7 +3.6 compare
seeds Growth on radish seeds for 72 hours +0.7 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.7 compare