Fitness data for PS417_14345 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Glycine cleavage system transcriptional activator GcvA
KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Phosphomycin 0.002 mg/ml -1.1 -3.6 compare
stress Phosphomycin 0.003 mg/ml -0.8 -3.0 compare
stress Phosphomycin 0.001 mg/ml -0.8 -3.6 compare
phage JP1 MOI 1 -0.7 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.5 compare
phage P. simiae ORA MOI 0.1 +0.5 +2.1 compare
phage P. simiae OR Antrim MOI 1 +0.5 +1.1 compare
soil soil sample 5; outgrowth in LB +0.5 +1.0 compare
stress 6-methoxy-2(3H)-benzoxazolone 1.2 mM +0.5 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.3 compare
motility outer cut, LB soft agar motility assay +0.6 +2.1 compare
phage P. simiae OR Antrim MOI 1 +0.6 +2.0 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.7 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +3.1 compare
stress methylglyoxal 0.032 vol% +1.2 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.4 +2.4 compare
seeds Growth on radish seeds for 72 hours +1.8 +3.0 compare