Fitness data for PS417_01425 in Pseudomonas simiae WCS417

AraC family transcriptional regulator
SEED: transcriptional regulator, AraC family
KEGG: AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage P. simiae ORA MOI 0.1 -2.0 -3.1 compare
phage P. simiae ORA MOI 10 -1.2 -2.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.2 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -2.3 compare
phage JP1 MOI 1 -0.9 -2.0 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -0.9 -2.7 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.8 -1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.8 -2.4 compare
carbon source Carbon source D-Mannitol 5 mM -0.8 -2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -1.1 compare
seeds Growth on radish seeds for 72 hours -0.8 -1.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.8 +2.7 compare
soil soil sample 5; outgrowth in LB +0.9 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.6 compare
phage Wcs_1 +1.1 +3.0 compare
supernatant control Vogels_fungal_media 0.1X +1.2 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +2.7 compare