Fitness data for PS417_14020 in Pseudomonas simiae WCS417

diguanylate phosphodiesterase
SEED: Rtn protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Doxycycline hyclate 0.001 mg/ml -0.8 -4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.6 compare
stress Tetracycline 0.001 mg/ml -0.7 -3.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -3.6 compare
stress methylglyoxal 0.032 vol% -0.6 -2.5 compare
solid stress Fraxetin 3 mM; solid stress -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.8 compare
soil soil sample 8; outgrowth in LB -0.5 -2.6 compare
nitrogen source Adenine (N) -0.5 -2.3 compare
solid stress Fraxetin 3 mM; solid stress -0.5 -1.7 compare
carbon source Inosine (C) -0.5 -2.9 compare
carbon source Xylitol (C) -0.5 -2.9 compare
solid stress Fraxetin 3 mM; solid stress -0.5 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.1 compare
stress Chloramphenicol 0.015 mg/ml -0.4 -2.3 compare
soil soil sample 7; outgrowth in LB -0.4 -2.1 compare
carbon source a-Ketoglutaric (C) -0.4 -2.6 compare
carbon source D-Fructose (C) -0.4 -2.8 compare
stress Neomycin 0.04 mg/ml +0.8 +3.5 compare