Fitness data for PS417_13660 in Pseudomonas simiae WCS417

AsnC family transcriptional regulator
SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
KEGG: Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
solid stress Fraxetin 3 mM; solid stress -1.2 -1.9 compare
soil soil sample 6; outgrowth in LB -1.1 -1.4 compare
soil soil sample 5; outgrowth in LB -1.1 -1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -2.0 compare
phage JP1 MOI 10 -1.0 -1.8 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.9 -1.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.8 -0.8 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.7 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.8 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +1.8 compare
solid stress 80% Methanol 1 mM; solid stress +0.8 +2.8 compare
phage P. simiae ORA MOI 1 +0.9 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.0 +3.2 compare
phage P. simiae OR1 MOI 0.1 +1.1 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.6 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +3.0 +1.4 compare