Fitness data for PS417_13640 in Pseudomonas simiae WCS417

ribose ABC transporter permease
SEED: Xylose ABC transporter, permease protein XylH
KEGG: ribose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.6 compare
seeds Growth on radish seeds for 24 hours -1.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -2.3 compare
carbon source Carbon source D-Mannitol 10 mM -1.1 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -1.4 compare
phage P. simiae OR Antrim MOI 10 -1.1 -1.3 compare
stress methylglyoxal 0.032 vol% -1.0 -1.3 compare
seeds Growth on radish seeds for 72 hours -1.0 -1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -1.5 compare
stress 6-methoxy-2(3H)-benzoxazolone 2.5 mM -0.9 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +2.1 compare
carbon source 2-Deoxy-D-Ribose (C) +0.9 +1.9 compare
phage JP1 MOI 1 +0.9 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.9 +1.1 compare
phage JP1 MOI 10 +1.0 +2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.1 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +1.4 compare