Fitness data for PS417_13555 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1)
KEGG: polar amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage JP1 MOI 1 -1.4 -2.6 compare
soil soil sample 6; outgrowth in LB -1.3 -3.3 compare
phage P. simiae OR1 MOI 0.1 -1.1 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.8 compare
carbon source L-Valine (C) -1.0 -1.8 compare
phage P. simiae OR Antrim MOI 0.1 -0.9 -2.8 compare
phage P. simiae ORA MOI 1 -0.8 -2.7 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.8 -1.5 compare
phage P. simiae ORA MOI 0.1 -0.8 -2.2 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -1.6 compare
stress Phosphomycin 0.003 mg/ml +0.7 +1.6 compare
stress Phosphomycin 0.001 mg/ml +0.7 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +1.3 compare
stress Neomycin 0.04 mg/ml +0.9 +2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.4 compare
stress Phosphomycin 0.002 mg/ml +1.0 +2.1 compare