Fitness data for PS417_13405 in Pseudomonas simiae WCS417

helicase UvrD
SEED: UvrD/REP helicase family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -2.5 compare
seeds Growth on radish seeds for 72 hours -0.5 -2.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -2.4 compare
stress Cisplatin 0.01 mg/ml -0.4 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.2 compare
carbon source L-Leucine (C) -0.4 -2.4 compare
phage Wcs_1 -0.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -2.0 compare
motility inner cut, LB soft agar motility assay -0.3 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -1.7 compare
carbon source octanoate (C) -0.3 -1.9 compare
phage P. simiae OR1 MOI 0.1 +0.3 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.2 compare
stress Gentamicin 0.008 mg/ml +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.8 compare