Fitness data for PS417_13300 in Pseudomonas simiae WCS417

short-chain dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage JP1 MOI 10 -1.3 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.0 -1.1 compare
phage JP1 MOI 1 -1.0 -0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -1.0 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.9 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.7 compare
stress 6-methoxy-2(3H)-benzoxazolone 2.5 mM -0.9 -1.7 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.8 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.2 compare
solid stress 80% Methanol 3 mM; solid stress +0.8 +0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.9 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.4 compare
phage P. simiae OR Antrim MOI 1 +1.0 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 +3.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.1 +3.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +4.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +2.8 +2.0 compare