Fitness data for PS417_13285 in Pseudomonas simiae WCS417

TonB-dependent receptor
SEED: iron aquisition outermembrane yersiniabactin receptor (FyuA,Psn,pesticin receptor)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.0 compare
solid stress Fraxetin 2 mM; solid stress -0.3 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.3 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.4 compare
motility outer cut, LB soft agar motility assay +0.3 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.5 compare
supernatant control Vogels_fungal_media 0.1X +0.3 +1.7 compare
phage P. simiae OR Antrim MOI 0.1 +0.3 +2.0 compare
seeds Growth on radish seeds for 24 hours +0.3 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.3 compare
seeds Growth on radish seeds for 72 hours +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.6 compare