Fitness data for PS417_13145 in Pseudomonas simiae WCS417

50S ribosomal protein L21
SEED: COGs COG3558
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -1.6 compare
stress Doxycycline hyclate 0.001 mg/ml -1.2 -1.5 compare
phage JP1 MOI 1 -1.2 -1.4 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM -1.1 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.1 -1.5 compare
seeds Growth on radish seeds for 24 hours -1.0 -1.5 compare
root root sample 6; outgrowth in LB -1.0 -1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.9 compare
carbon source D-Mannose (C) -0.9 -1.8 compare
phage P. simiae OR Antrim MOI 0.1 -0.9 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -0.9 compare
solid stress 80% Methanol 0.5 mM; solid stress +0.9 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +2.1 compare
phage P. simiae OR Antrim MOI 0.1 +1.0 +2.3 compare
nophagecontrol Only library +1.2 +2.0 compare