Fitness data for PS417_13140 in Pseudomonas simiae WCS417

oxidoreductase
SEED: Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
soil soil sample 5; outgrowth in LB -4.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.4 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.0 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -2.5 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.4 -1.7 compare
seeds Growth on radish seeds for 72 hours -2.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.1 -2.0 compare
phage P. simiae Grant Run MOI 0.1 -2.0 -1.8 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.6 -1.6 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM -1.6 -2.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.6 -2.0 compare
stress Doxycycline hyclate 0.001 mg/ml -1.5 -1.1 compare
seeds Growth on radish seeds for 72 hours -1.4 -1.5 compare
motility inner cut, LB soft agar motility assay -1.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -1.7 compare
carbon source L-Alanine (C) -1.4 -2.5 compare
phage P. simiae OR Antrim MOI 10 +1.3 +1.1 compare
nitrogen source Glycine (N) +1.6 +3.7 compare
phage JP1 MOI 0.1 +1.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +3.5 +2.7 compare