Fitness data for PS417_12920 in Pseudomonas simiae WCS417

endoribonuclease
SEED: RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.9 compare
phage P. simiae OR1 MOI 0.1 -0.7 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.5 compare
phage Wcs_1 -0.5 -2.0 compare
seeds Growth on radish seeds for 72 hours -0.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +0.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.8 compare
soil soil sample 3; outgrowth in LB +0.5 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.5 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.6 +0.8 compare
soil soil sample 6; outgrowth in LB +0.7 +1.0 compare
soil soil sample 4; outgrowth in LB +0.7 +0.9 compare
soil soil sample 7; outgrowth in LB +0.8 +1.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.1 +1.2 compare
root root sample 6; outgrowth in LB +1.1 +1.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.1 +1.2 compare