Fitness data for PS417_01280 in Pseudomonas simiae WCS417

peptidoglycan-binding protein LysM
SEED: FIG00954962: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
soil soil sample 5; outgrowth in LB -1.4 -1.7 compare
carbon source D-Sorbitol (C) -1.0 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.3 compare
phage Wcs_1 -0.9 -1.8 compare
soil soil sample 6; outgrowth in LB -0.9 -1.8 compare
root root sample 6; outgrowth in LB -0.8 -1.8 compare
stress Phosphomycin 0.001 mg/ml -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.4 compare
stress LB_noSalt with Chloride 1100 mM +0.9 +2.0 compare
phage Wcs_0.1 +0.9 +2.2 compare
stress LB_noSalt with Chloride 1100 mM +0.9 +2.4 compare
nitrogen source Glycine (N) +0.9 +2.0 compare
carbon source L-Valine (C) +0.9 +1.1 compare
stress LB_noSalt with Chloride 500 mM +1.0 +1.8 compare
stress Gentamicin 0.008 mg/ml +1.0 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +3.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +1.5 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.9 +1.2 compare