Fitness data for PS417_12740 in Pseudomonas simiae WCS417

secretion protein HlyD
SEED: Probable Co/Zn/Cd efflux system membrane fusion protein
KEGG: putative multidrug efflux transporter MdtA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -2.1 -2.8 compare
liquid stress Fraxetin 3 mM; liquid stress -1.9 -4.5 compare
liquid stress Fraxetin 3 mM; liquid stress -1.7 -3.3 compare
liquid stress Fraxetin 3 mM; liquid stress -1.6 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -1.7 compare
soil soil sample 5; outgrowth in LB -1.2 -1.5 compare
nophagecontrol Only library -1.2 -2.5 compare
phage P. simiae OR Antrim MOI 0.1 -1.1 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.3 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.4 compare
soil soil sample 2; outgrowth in LB -1.0 -1.7 compare
soil soil sample 8; outgrowth in LB -1.0 -1.9 compare
liquid stress Fraxetin 3 mM; liquid stress -1.0 -2.4 compare
liquid stress Fraxetin 3 mM; liquid stress -1.0 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -1.9 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.8 -1.6 compare
soil soil sample 6; outgrowth in LB +0.9 +1.1 compare
stress Phosphomycin 0.003 mg/ml +0.9 +2.2 compare
stress Gentamicin 0.008 mg/ml +1.1 +0.9 compare