Fitness data for PS417_12735 in Pseudomonas simiae WCS417

peroxidase
SEED: Thiol peroxidase, Tpx-type (EC 1.11.1.15)
KEGG: thiol peroxidase, atypical 2-Cys peroxiredoxin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -1.6 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.4 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.3 -1.2 compare
no phage control Time6-nophage -1.1 -1.6 compare
solid stress Fraxetin 2 mM; solid stress -1.1 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.6 compare
temperature LB 42C -1.0 -2.4 compare
carbon source L-Glutamine (C) -1.0 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -1.0 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -0.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -0.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.1 compare
carbon source Carbon source D-Mannitol 2.5 mM +0.9 +2.3 compare
stress methylglyoxal 0.032 vol% +0.9 +1.0 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.0 +1.7 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +1.0 +2.0 compare
phage P. simiae OR Antrim MOI 1 +1.1 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.3 +4.0 compare