Fitness data for PS417_01270 in Pseudomonas simiae WCS417

iron ABC transporter substrate-binding protein
SEED: Formate dehydrogenase chain D (EC 1.2.1.2)
KEGG: FdhD protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
solid stress Fraxetin 2 mM; solid stress -4.7 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -1.2 compare
stress Gentamicin 0.008 mg/ml -1.8 -1.5 compare
carbon source L-Histidine (C) -1.6 -3.4 compare
solid stress Fraxetin 3 mM; solid stress -1.6 -2.5 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.5 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -1.4 compare
liquid stress Scopoletin 3 mM; liquid stress -1.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.3 -1.1 compare
phage P. simiae Grant Run MOI 0.1 -1.3 -1.4 compare
liquid stress Fraxetin 2 mM; liquid stress -1.3 -2.0 compare
stress 2-Furfuraldehyde 0.03 vol% -1.3 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.2 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.3 +2.9 compare
seeds Growth on radish seeds for 72 hours +1.4 +1.8 compare
carbon source L-Valine (C) +1.6 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +8.0 +2.4 compare