Fitness data for PS417_12645 in Pseudomonas simiae WCS417

carboxylate--amine ligase
SEED: ribosomal protein S6 glutaminyl transferase related protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage JP1 MOI 1 -0.5 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.9 compare
phage JP1 MOI 1 -0.4 -2.4 compare
phage P. simiae ORA MOI 0.1 -0.4 -1.6 compare
phage JP1 MOI 10 -0.4 -2.1 compare
phage P. simiae OR Antrim MOI 1 -0.3 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.4 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.3 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.3 +1.9 compare
solid stress 80% Methanol 2 mM; solid stress +0.3 +1.8 compare
phage P. simiae Grant Run MOI 0.1 +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.4 compare
stress methylglyoxal 0.032 vol% +0.4 +1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +1.4 compare
stress Gentamicin 0.008 mg/ml +0.4 +1.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.8 compare