Fitness data for PS417_12350 in Pseudomonas simiae WCS417

cobalamin biosynthesis protein CobN
SEED: CobN component of cobalt chelatase involved in B12 biosynthesis

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source Adenosine (N) -1.9 -11.1 compare
soil soil sample 3; outgrowth in LB -1.0 -5.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -5.4 compare
ecofab LB in EcoFAB_3.5mL -0.9 -6.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -5.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.7 -3.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -4.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.7 -4.3 compare
soil soil sample 2; outgrowth in LB -0.7 -3.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -4.0 compare
soil soil sample 4; outgrowth in LB -0.7 -3.6 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -3.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -4.4 compare
carbon source Gly-Glu (C) -0.7 -5.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -4.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -3.8 compare
soil soil sample 5; outgrowth in LB -0.6 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -3.3 compare
nitrogen source Glycine (N) +2.8 +21.7 compare