Fitness data for PS417_12215 in Pseudomonas simiae WCS417

lytic transglycosylase
SEED: Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)
KEGG: membrane-bound lytic murein transglycosylase D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress Neomycin 0.04 mg/ml -1.5 -5.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.1 compare
stress L-Lysine 60 mM -0.8 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -3.0 compare
phage JP1 MOI 0.1 -0.7 -2.7 compare
liquid stress Fraxetin 3 mM; liquid stress +0.7 +3.3 compare
solid stress Fraxetin 2 mM; solid stress +0.7 +3.3 compare
solid stress Fraxetin 2 mM; solid stress +0.8 +4.7 compare
solid stress Fraxetin 3 mM; solid stress +0.8 +5.9 compare
liquid stress Fraxetin 3 mM; liquid stress +0.8 +4.5 compare
stress Nalidixic 0.025 mg/ml +0.8 +4.9 compare
liquid stress Fraxetin 3 mM; liquid stress +0.8 +4.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.2 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM +0.9 +5.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.4 compare
solid stress Fraxetin 3 mM; solid stress +1.0 +5.0 compare
stress Tetracycline 0.001 mg/ml +1.0 +6.6 compare
solid stress Fraxetin 3 mM; solid stress +1.1 +5.3 compare
solid stress Fraxetin 3 mM; solid stress +1.2 +7.3 compare
stress Doxycycline hyclate 0.001 mg/ml +1.6 +8.7 compare