Fitness data for PS417_01150 in Pseudomonas simiae WCS417

taurine ABC transporter substrate-binding protein
SEED: Taurine-binding periplasmic protein TauA
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress methylglyoxal 0.032 vol% -1.2 -2.6 compare
soil soil sample 2; outgrowth in LB -0.7 -2.1 compare
motility inner cut, LB soft agar motility assay -0.6 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.8 compare
carbon source L-Valine (C) -0.5 -1.3 compare
solid stress Fraxetin 0.5 mM; solid stress +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.3 compare
phage P. simiae ORA MOI 0.1 +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.1 compare
ecofab LB in EcoFAB_3.5mL +0.5 +2.5 compare
solid stress 80% Methanol 3 mM; solid stress +0.5 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +2.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.6 +2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +2.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.8 +3.5 compare
seeds Growth on radish seeds for 72 hours +1.0 +4.0 compare