Fitness data for PS417_11570 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: ABC-type spermidine/putrescine transport system, permease component I
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -1.4 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.8 compare
seeds Growth on radish seeds for 72 hours -1.3 -1.9 compare
liquid stress 80% Methanol 2 mM; liquid stress -1.2 -2.8 compare
phage JP1 MOI 1 -1.2 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.8 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -1.6 compare
carbon source L-Valine (C) -0.8 -1.0 compare
phage JP1 MOI 0.1 -0.8 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.8 +2.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +4.2 compare
phage P. simiae Grant Run MOI 0.1 +1.2 +3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 +1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.9 +3.3 compare