Fitness data for PS417_11515 in Pseudomonas simiae WCS417

sugar ABC transporter substrate-binding protein
SEED: Various polyols ABC transporter, periplasmic substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Sorbitol (C) -2.4 -3.2 compare
carbon source D-Sorbitol (C) -2.0 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.2 compare
phage P. simiae ORA MOI 0.1 -0.6 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.8 compare
carbon source L-Citrulline (C) -0.5 -2.7 compare
carbon source L-Valine (C) -0.5 -1.6 compare
carbon source Xylitol (C) -0.5 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
stress Phosphomycin 0.003 mg/ml +0.5 +2.1 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.0 compare
carbon source Carbon source D-Mannitol 5 mM +0.5 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.2 compare
seeds Growth on radish seeds for 72 hours +0.6 +2.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.7 +2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.6 compare