Fitness data for PS417_01135 in Pseudomonas simiae WCS417

taurine dioxygenase
SEED: Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)
KEGG: taurine dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
root root sample 6; outgrowth in LB -1.2 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.0 compare
phage P. simiae OR1 MOI 0.1 -1.1 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.9 compare
phage P. simiae ORA MOI 0.1 -0.9 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.6 compare
phage P. simiae Grant Run MOI 10 -0.9 -2.5 compare
phage JP1 MOI 10 -0.9 -2.5 compare
phage P. simiae Grant Run MOI 10 -0.9 -2.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.8 -2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.8 +3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.8 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.0 compare
phage JP1 MOI 0.1 +1.1 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +2.8 compare