Fitness data for PS417_11360 in Pseudomonas simiae WCS417

energy transducer TonB
SEED: Ferric siderophore transport system, periplasmic binding protein TonB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.2 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -1.0 -2.5 compare
phage JP1 MOI 10 -0.9 -1.6 compare
root root sample 6; outgrowth in LB -0.9 -1.4 compare
solid stress Fraxetin 3 mM; solid stress -0.9 -1.6 compare
solid stress Fraxetin 2 mM; solid stress -0.9 -1.7 compare
phage P. simiae OR Antrim MOI 0.1 -0.8 -1.9 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -1.5 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x -0.8 -2.5 compare
phage P. simiae OR1 MOI 0.1 -0.7 -1.4 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 -0.7 -2.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +1.8 compare
seeds Growth on radish seeds for 24 hours +0.8 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.5 compare
phage P. simiae Grant Run MOI 10 +1.2 +3.1 compare