Fitness data for PS417_11315 in Pseudomonas simiae WCS417

hemagglutinin
SEED: Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
phage JP1 MOI 1 -0.3 -2.1 compare
stress LB_noSalt with Chloride 1100 mM -0.3 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.7 compare
phage P. simiae OR Antrim MOI 10 -0.2 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.2 -1.6 compare
seeds Growth on radish seeds for 72 hours +0.2 +1.4 compare
soil soil sample 7; outgrowth in LB +0.2 +1.2 compare
solid stress Fraxetin 0.5 mM; solid stress +0.2 +1.8 compare
stress Phosphomycin 0.001 mg/ml +0.2 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 +1.6 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.2 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.4 compare
root root sample 6; outgrowth in LB +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.7 compare