Fitness data for PS417_01120 in Pseudomonas simiae WCS417

choline transporter
SEED: High-affinity choline uptake protein BetT
KEGG: high-affinity choline transport protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage JP1 MOI 10 -0.4 -1.7 compare
phage P. simiae Grant Run MOI 0.1 -0.4 -2.0 compare
phage JP1 MOI 0.1 -0.4 -1.5 compare
stress LB_noSalt with Chloride 1100 mM -0.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.0 compare
stress Choline chloride 300 mM -0.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.4 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.5 compare
solid stress Fraxetin 3 mM; solid stress +0.4 +1.7 compare
phage P. simiae ORA MOI 0.1 +0.4 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.6 compare
liquid stress Fraxetin 3 mM; liquid stress +0.4 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.5 compare
stress Paraquat dichloride 0.002 mg/ml +0.6 +4.0 compare
stress Paraquat dichloride 0.008 mg/ml +1.2 +7.6 compare
stress Thallium(I) acetate 0.0625 mg/ml +1.5 +8.9 compare