Fitness data for PS417_11030 in Pseudomonas simiae WCS417

L-arabinose transporter ATP-binding protein
SEED: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
KEGG: L-arabinose transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Arabinose (C) -1.9 -8.8 compare
carbon source L-Arabinose (C) -1.8 -9.1 compare
seeds Growth on radish seeds for 72 hours -0.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -1.8 compare
phage JP1 MOI 10 -0.5 -2.0 compare
phage P. simiae ORA MOI 0.1 -0.4 -2.2 compare
phage P. simiae OR Antrim MOI 10 -0.4 -2.0 compare
phage JP1 MOI 10 -0.3 -1.5 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.3 -1.7 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.3 +1.7 compare
phage JP1 MOI 0.1 +0.3 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB +0.3 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare