Fitness data for PS417_11025 in Pseudomonas simiae WCS417

sugar ABC transporter substrate-binding protein
SEED: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
KEGG: L-arabinose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Arabinose (C) -1.3 -5.4 compare
carbon source L-Arabinose (C) -1.2 -4.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.2 compare
phage P. simiae Grant Run MOI 0.1 -0.8 -2.5 compare
soil soil sample 2; outgrowth in LB -0.7 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -1.7 compare
seeds Growth on radish seeds for 72 hours -0.6 -1.8 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.6 -2.2 compare
supernatant control Vogels_fungal_media 0.1X -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.9 compare
phage P. simiae OR Antrim MOI 0.1 -0.6 -2.3 compare
soil soil sample 6; outgrowth in LB -0.6 -1.7 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.6 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.9 compare
stress Gentamicin 0.008 mg/ml +0.6 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +2.7 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +3.0 compare