Fitness data for PS417_11000 in Pseudomonas simiae WCS417

L-arabonate dehydratase (EC 4.2.1.25) (from data)
Original annotation: dihydroxy-acid dehydratase
SEED: L-arabonate dehydratase (EC 4.2.1.25)
KEGG: dihydroxy-acid dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source L-Arabinose (C) -5.1 -6.0 compare
carbon source L-Arabinose (C) -4.0 -8.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.8 -3.0 compare
seeds Growth on radish seeds for 72 hours -1.4 -3.2 compare
seeds Growth on radish seeds for 72 hours -1.4 -2.6 compare
soil soil sample 4; outgrowth in LB -1.3 -1.9 compare
root root sample 6; outgrowth in LB -1.2 -2.8 compare
phage JP1 MOI 1 -1.2 -2.1 compare
soil soil sample 3; outgrowth in LB -1.1 -2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.1 -1.9 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x -0.9 -3.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -2.1 compare
seeds Growth on radish seeds for 72 hours -0.8 -1.6 compare
seeds Growth on radish seeds for 24 hours -0.8 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +2.1 compare