Fitness data for PS417_10940 in Pseudomonas simiae WCS417

sugar ABC transporter substrate-binding protein
SEED: Xylose ABC transporter, periplasmic xylose-binding protein XylF
KEGG: D-xylose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.1 compare
liquid stress Fraxetin 3 mM; liquid stress -0.5 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -2.1 compare
phage P. simiae OR Antrim MOI 10 -0.5 -1.6 compare
phage JP1 MOI 1 -0.5 -1.6 compare
phage P. simiae Grant Run MOI 10 -0.5 -1.5 compare
carbon source L-Histidine (C) -0.5 -2.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
soil soil sample 3; outgrowth in LB +0.5 +1.7 compare
solid stress Fraxetin 2 mM; solid stress +0.5 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.3 compare
phage P. simiae Grant Run MOI 0.1 +0.7 +2.0 compare