Fitness data for PS417_10630 in Pseudomonas simiae WCS417

hydratase
SEED: Aliphatic amidase AmiE (EC 3.5.1.4)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
soil soil sample 7; outgrowth in LB -0.4 -1.4 compare
motility outer cut, LB soft agar motility assay -0.4 -2.5 compare
carbon source 2-Deoxy-D-Ribose (C) -0.3 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.7 compare
carbon source pyruvate (C) -0.3 -2.3 compare
solid stress Scopoletin 2 mM; solid stress -0.3 -1.7 compare
supernatant control Vogels_fungal_media 0.1X -0.3 -1.3 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -0.3 -1.9 compare
root root sample 6; outgrowth in LB -0.3 -0.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.6 compare
soil soil sample 6; outgrowth in LB -0.3 -1.4 compare
stress LB_noSalt with Chloride 500 mM +0.2 +1.5 compare
phage P. simiae Grant Run MOI 0.1 +0.3 +1.3 compare
stress Doxycycline hyclate 0.001 mg/ml +0.3 +1.6 compare
phage JP1 MOI 1 +0.3 +1.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.9 compare