Fitness data for PS417_10470 in Pseudomonas simiae WCS417

membrane protein
SEED: FIG006303: protein yraQ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
soil soil sample 5; outgrowth in LB -0.6 -1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.6 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -2.2 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.5 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.5 +2.0 compare
solid stress Fraxetin 1 mM; solid stress +0.5 +2.8 compare
phage P. simiae OR Antrim MOI 1 +0.5 +2.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.6 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.2 compare
phage P. simiae ORA MOI 0.1 +0.6 +2.1 compare
phage P. simiae OR Antrim MOI 10 +0.6 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.0 compare