Fitness data for PS417_10465 in Pseudomonas simiae WCS417

tRNA 2-selenouridine synthase
SEED: Selenophosphate-dependent tRNA 2-selenouridine synthase
KEGG: tRNA 2-selenouridine synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
phage P. simiae OR1 MOI 0.1 -0.7 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.4 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.7 compare
carbon source 2-Deoxy-D-Ribose (C) -0.6 -2.8 compare
phage P. simiae OR Antrim MOI 0.1 -0.6 -1.9 compare
solid stress Fraxetin 2 mM; solid stress -0.5 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.5 -2.0 compare
soil soil sample 3; outgrowth in LB -0.5 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
carbon source Gly-Glu (C) +0.5 +2.9 compare
carbon source L-Valine (C) +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +3.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.7 compare