Fitness data for PS417_10315 in Pseudomonas simiae WCS417

cytochrome C biogenesis protein
SEED: DipZ protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -0.6 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.5 -1.8 compare
motility inner cut, LB soft agar motility assay -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.5 compare
soil soil sample 3; outgrowth in LB -0.3 -1.4 compare
carbon source succinate (C) -0.3 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -1.4 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.3 +1.5 compare
carbon source Glycerol (C) +0.3 +2.2 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.3 +2.2 compare
carbon source NAG (C) +0.3 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.0 compare
liquid stress 80% Methanol 2 mM; liquid stress +0.4 +2.3 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.3 compare
phage P. simiae OR Antrim MOI 1 +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.3 compare