Fitness data for PS417_00100 in Pseudomonas simiae WCS417

peptidoglycan-binding protein
SEED: Uncharacterized protein with LysM domain, COG1652

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.6 compare
motility outer cut, LB soft agar motility assay -0.8 -3.8 compare
soil soil sample 3; outgrowth in LB -0.7 -2.3 compare
stress Cisplatin 0.01 mg/ml -0.6 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6 -2.3 compare
phage JP1 MOI 1 -0.6 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.4 compare
phage JP1 MOI 1 -0.6 -1.3 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.6 -1.8 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.0 compare
stress Doxycycline hyclate 0.001 mg/ml -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.7 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x -0.5 -2.4 compare
carbon source L-Lactate (C) -0.5 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.0 compare
phage P. simiae ORA MOI 1 +0.7 +2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.1 compare
phage JP1 MOI 0.1 +0.7 +1.6 compare