Fitness data for PS417_00965 in Pseudomonas simiae WCS417

AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage JP1 MOI 10 -0.8 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.6 compare
phage P. simiae ORA MOI 1 -0.7 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.6 compare
stress methylglyoxal 0.032 vol% -0.6 -1.0 compare
solid stress 80% Methanol 2 mM; solid stress -0.5 -2.0 compare
phage JP1 MOI 0.1 -0.5 -1.3 compare
motility inner cut, LB soft agar motility assay -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -0.9 compare
phage P. simiae OR Antrim MOI 0.1 -0.5 -1.5 compare
motility outer cut, LB soft agar motility assay -0.5 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -3.0 compare
motility inner cut, LB soft agar motility assay -0.5 -1.6 compare
carbon source D-Glucosamine Hydrochloride (C) -0.4 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
nitrogen source Cytidine (N) +0.4 +1.1 compare
soil soil sample 4; outgrowth in LB +0.4 +1.2 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.6 +2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.7 +2.7 compare