Fitness data for PS417_09560 in Pseudomonas simiae WCS417

TonB-dependent receptor
SEED: Ferrichrome-iron receptor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.5 compare
stress methylglyoxal 0.032 vol% -0.4 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.2 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.3 +1.7 compare
phage P. simiae OR Antrim MOI 0.1 +0.3 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +1.0 compare
phage P. simiae ORA MOI 1 +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.4 compare
root root sample 6; outgrowth in LB +0.4 +1.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +1.2 compare