Fitness data for PS417_09475 in Pseudomonas simiae WCS417

class V aminotransferase
SEED: Cysteine desulfurase (EC 2.8.1.7)
KEGG: cysteine desulfurase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.0 compare
phage JP1 MOI 10 -0.9 -1.7 compare
phage JP1 MOI 1 -0.9 -1.4 compare
solid stress Fraxetin 0.5 mM; solid stress -0.9 -2.5 compare
no phage control Time6-nophage -0.8 -2.4 compare
phage JP1 MOI 0.1 -0.8 -2.2 compare
nophagecontrol Only library -0.8 -2.2 compare
phage P. simiae OR Antrim MOI 10 -0.8 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.8 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.5 compare
carbon source L-Citrulline (C) -0.7 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.2 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.7 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.6 -2.2 compare
supernatant control Vogels_fungal_media 0.1X +0.6 +1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.7 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.0 compare
carbon source Carbon source D-Mannitol 5 mM +0.8 +2.1 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.8 +2.9 compare