Fitness data for PS417_09440 in Pseudomonas simiae WCS417

MerR family transcriptional regulator
SEED: Redox-sensitive transcriptional activator SoxR
KEGG: MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
phage JP1 MOI 0.1 -2.2 -2.0 compare
root root sample 6; outgrowth in LB -2.1 -1.7 compare
soil soil sample 8; outgrowth in LB -1.5 -1.7 compare
seeds Growth on radish seeds for 72 hours -1.4 -1.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -1.7 compare
phage P. simiae Grant Run MOI 0.1 -1.1 -1.4 compare
phage JP1 MOI 10 -1.0 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -1.2 compare
soil soil sample 5; outgrowth in LB -1.0 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -0.8 compare
stress 6-methoxy-2(3H)-benzoxazolone 1.2 mM -1.0 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -1.4 compare
phage P. simiae OR Antrim MOI 10 +1.0 +1.3 compare
nitrogen source Inosine (N) +1.1 +1.6 compare
nitrogen source Urea (N) +1.7 +1.4 compare