Fitness data for PS417_09245 in Pseudomonas simiae WCS417

recombinase RdgC
SEED: DNA recombination-dependent growth factor C
KEGG: recombination associated protein RdgC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.3 -1.7 compare
phage P. simiae Grant Run MOI 10 -3.9 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.5 -2.0 compare
solid stress Fraxetin 2 mM; solid stress -3.0 -1.7 compare
supernatant control Vogels_fungal_media 0.1X -2.6 -1.8 compare
stress methylglyoxal 0.032 vol% -2.4 -1.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.4 -1.7 compare
phage P. simiae OR Antrim MOI 10 -2.4 -1.7 compare
solid stress Scopoletin 2 mM; solid stress -2.3 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.2 -2.1 compare
liquid stress 80% Methanol 3 mM; liquid stress -2.1 -1.8 compare
solid stress Scopoletin 1 mM; solid stress -2.0 -2.3 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -2.0 -1.6 compare
solid stress Fraxetin 3 mM; solid stress -2.0 -1.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.9 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.8 -1.5 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.8 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -1.2 compare